PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03779.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 260aa    MW: 28502.3 Da    PI: 9.8628
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03779.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.92.6e-15228260132
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gC 32 
                                   ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +C
  Zpz_sc03779.1.g00010.1.am.mk 228 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSC 260
                                   58**************************98777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182909.94E-13224260IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-13225260IPR003657WRKY domain
SMARTSM007746.3E-6228259IPR003657WRKY domain
PfamPF031065.8E-11229260IPR003657WRKY domain
PROSITE profilePS5081115.64230260IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MTRVMTIRGM TRTPLTSARV PRRVRRVGTE RSQQSHDPPL YSTTPAVGSQ ASKIPSARGN  60
SIPLHRETTM LLMDSARHAG YSPVSLDLNV GLPSMPPPRR DMETEADTQP DRPVGGRAAA  120
PMTDEEANKT LLEAKLTEAS EENRRLHEMI AYLHANTASP GLPSPAAGCK KRIRLESPDP  180
SNSCDGGNGD RNDPESARLG VIDEASCKRI KVIRVCTRIN PVDTALAVKD GYQWRKYGQK  240
VTRDNPSPRA YFRCAFAPSC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956831.16e-60PREDICTED: WRKY transcription factor 18-like
TrEMBLA0A0A9SU374e-64A0A0A9SU37_ARUDO; WRKY
STRINGSi030429m2e-59(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.11e-24WRKY DNA-binding protein 18